get_unknown_ppi_nodes {XINA} | R Documentation |
Get proteins with no known interactions within the cluster based on the used protein-protein interaction database source
get_unknown_ppi_nodes(xina_result, cl)
xina_result |
A list containing XINA network analysis results. See xina_analysis |
cl |
the clustering number of XINA clustering results. See xina_clustering |
A data frame containing proteins with no known interactions within the cluster based on the used protein-protein interaction database source
# load XINA example data data(xina_example) # load the previously processed XINA analysis results # if you want to learn how to run 'xina_analysis', please see \link[XINA]{xina_analysis} data(xina_result_example) # Extract unknown PPI nodes in the cluster #1 get_unknown_ppi_nodes(xina_result_example, 1)