Miscellaneous SCE {SingleCellExperiment}R Documentation

Miscellaneous SCE methods

Description

Various methods for the SingleCellExperiment class.

Usage

## S4 method for signature 'SingleCellExperiment'
show(object)

## S4 method for signature 'SingleCellExperiment'
objectVersion(x)

Arguments

x, object

A SingleCellExperiment object.

Details

The show method will print out information about the data contained in object. This describes the stored assays and row/column metadata, as done in show,SummarizedExperiment-method. The names of the reducedDims slot and the names of the spike-ins (see spikeNames) are also reported.

The objectVersion method will return the version of the package with which x was constructed. This is useful for checking if the object is up to date relative to the latest versions of the package.

Value

For show, a message is printed to screen describing the data stored in object.

For objectVersion, an object of class package_version is returned.

See Also

SingleCellExperiment

Examples

example(SingleCellExperiment, echo=FALSE) # Using the class example
show(sce)
objectVersion(sce)

[Package SingleCellExperiment version 1.4.1 Index]