DSresultExonTable {SeqGSEA} | R Documentation |
Form a table for differential splicing analysis results at the Exon level.
DSresultExonTable(RCS)
RCS |
A ReadCountSet object with |
A data frame containing each exon's NB-statistics, p-values and adjusted p-values for differential splicing analysis.
A matrix containing exon DS analysis results, including testability, NBstats, p-values and adjusted p-values.
Xi Wang, xi.wang@newcastle.edu.au
DSresultGeneTable
,
DSpermutePval
data(RCS_example, package="SeqGSEA") permuteMat <- genpermuteMat(RCS_example, times=10) RCS_example <- exonTestability(RCS_example) RCS_example <- estiExonNBstat(RCS_example) RCS_example <- estiGeneNBstat(RCS_example) RCS_example <- DSpermutePval(RCS_example, permuteMat) head(DSresultExonTable(RCS_example))