unifyProteinGroupLabels {SWATH2stats}R Documentation

Unify the protein group labels

Description

Unify the protein group labels (2/ProteinA/ProteinB and 2/ProteinB/ProteinA) to one common label (e.g. 2/ProteinA/ProteinB)

Usage

unifyProteinGroupLabels(data)

Arguments

data

A data frame containing SWATH data.

Value

Returns a data frame with the unififed protein labels.

Author(s)

Moritz Heusel

Examples

data("OpenSWATH_data", package="SWATH2stats")
data("Study_design", package="SWATH2stats")
data <- sample_annotation(OpenSWATH_data, Study_design)
data.filtered.decoy <- filter_mscore(data, 0.01) 
data.unified <- unifyProteinGroupLabels(data.filtered.decoy)

[Package SWATH2stats version 1.12.1 Index]