validatePrepMergeParameters {RJMCMCNucleosomes} | R Documentation |
postMerge
functionValidation of all parameters needed by the public
postMerge
function.
validatePrepMergeParameters(reads, seqName, resultRJMCMC, extendingSize, chrLength)
reads |
a |
seqName |
a |
resultRJMCMC |
an object of |
extendingSize |
a positive |
chrLength |
a positive |
0
indicating that all parameters validations have been
successful.
Astrid Deschenes
## Load dataset containing forward and reverse reads data(reads_demo_01) ## Load dataset containing nucleosome information file_002 <- dir(system.file("extdata", package = "RJMCMCNucleosomes"), pattern = "RJMCMC_seg_02.RDS", full.names = TRUE) nucleosome_info <- readRDS(file_002) ## The function returns 0 when all parameters are valid RJMCMCNucleosomes:::validatePrepMergeParameters(reads = reads_demo_01, seqName = "chr_SYNTHETIC", resultRJMCMC = nucleosome_info, extendingSize = 74, chrLength = 10000000) ## The function raises an error when at least one paramater is not valid ## Not run: RJMCMCNucleosomes:::validatePrepMergeParameters( reads = c(72400, 72431, 72428, 72429, 72426), resultRJMCMC = NA, extendingSize = 74, chrLength = 10000000) ## End(Not run)