performNormalizations {NormalyzerDE} | R Documentation |
Main function for executing normalizations
performNormalizations(nr, forceAll, rtNorm, rtStepSizeMinutes, rtWindowMinCount, rtWindowShifts, rtWindowMergeMethod, quiet) ## S4 method for signature 'NormalyzerResults' performNormalizations(nr, forceAll = FALSE, rtNorm = FALSE, rtStepSizeMinutes = 1, rtWindowMinCount = 100, rtWindowShifts = 1, rtWindowMergeMethod = "median")
nr |
Normalyzer results object. |
forceAll |
Ignore dataset size limits and run all normalizations (only meant for testing purposes) |
rtNorm |
Perform retention time based normalizations |
rtStepSizeMinutes |
Retention time normalization window size. |
rtWindowMinCount |
Minimum number of datapoints in each retention-time segment. |
rtWindowShifts |
Number of layered retention time normalized windows. |
rtWindowMergeMethod |
Merge approach for layered retention time windows. |
nr NormalyzerDE results object