addQCFlags,RccSet-method {NanoStringQCPro}R Documentation

Add sample QC flags to an rccSet

Description

Returns a copy of the input RccSet with columns added to pData from the provided sample QC flag annotation file. (That file is produced by makeQCReport(); see its help page for more details.)

Usage

## S4 method for signature 'RccSet'
addQCFlags(rccSet, flagFile)

Arguments

rccSet

An RccSet object

flagFile

Path to a sample QC flag file as generated by the NanoStringQCPro QC report (see makeQCReport())

Value

A copy of the input RccSet with columns added to pData from the QC flag file.

Author(s)

Dorothee Nickles


[Package NanoStringQCPro version 1.14.0 Index]