DNAcopyParam {MinimumDistance} | R Documentation |
Creates an instance of a parameter class for circular binary
segmentation of the minimum distance and the log R ratios.
Parameters in this object are passed to the segment
function
in the package DNAcopy.
DNAcopyParam(alpha = 0.01, min.width = 2L, undo.splits = c("none", "prune", "sdundo"), undo.SD = 3)
alpha |
see |
min.width |
see |
undo.splits |
see |
undo.SD |
see |
segment_params <- DNAcopyParam(alpha=0.01) params <- MinDistParam(dnacopy=segment_params)