RiverPlot {MSstatsQC} | R Documentation |
A function to create river plot to aggregate results from X and mR charts or CUSUMm and CUSUMv charts.
RiverPlot(data = NULL, L = 1, U = 5, method = "XmR", listMean = NULL, listSD = NULL)
data |
omma-separated (.csv), metric file. It should contain a "Precursor" column and the metrics columns. It should also include "Annotations" for each observation. |
L |
lower bound of the guide set. |
U |
upper bound of the guide set. |
method |
defines the method selected to construct control charts. |
listMean |
list of the means for each metric. It is used when mean is known. It is NULL when mean is not known. The default is NULL. |
listSD |
list of the standard deviations for each metric. It is used when standard deviation is known. It is NULL when mean is not known. The default is NULL. |
A river plot to aggregate results per metric generated from XmR.Summary.DataFrame
data frame or CUSUM.Summary.DataFrame
data frame.
# First process the data to make sure it's ready to use sampleData <- DataProcess(S9Site54) head(sampleData) # Draw XmR summary plot RiverPlot(data = sampleData) RiverPlot(data = sampleData, L=1, U=20, method = "XmR", listMean = list("BestRetentionTime" = 27.78, "TotalArea" = 35097129, "MaxFWHM" = 0.28, "PeakAssymetry" = 0.98), listSD = list("BestRetentionTime" = 8.19, "TotalArea" = 34132861, "MaxFWHM" = 0.054, "PeakAssymetry" = 0.002) )