mm9-Genes {MMDiff2} | R Documentation |
Subset of Genes from the mm9 annotation that overlap with example Peaks in the Cfp1-Peaks file.
data('mm9-Genes')
contains, GR a GRanges object with 800 ranges
# data was created as follows: ## Not run: data('Cfp1-Peaks') library(TxDb.Mmusculus.UCSC.mm9.knownGene) txdb <- TxDb.Mmusculus.UCSC.mm9.knownGene #shorthand (for convenience) txdb GR <- transcripts(txdb) ov <- findOverlaps(GR,Peaks) GR <- GR[queryHits(ov)] save(file = 'data/mm9-Genes.rData',GR) ## End(Not run)