SceToSingleCellAssay {MAST} | R Documentation |
Coerce a SingleCellExperiment to some class defined in MAST
Description
Coerce a SingleCellExperiment to some class defined in MAST
Usage
SceToSingleCellAssay(sce, class = "SingleCellAssay",
check_sanity = TRUE)
Arguments
sce |
object inheriting from SingleCellExperiment
|
class |
character naming the class to be coerced to
|
check_sanity |
(default: TRUE ) Set FALSE to override sanity checks that try to ensure that the default assay is log-transformed and has at least one exact zero. See defaultAssay for details on the "default assay" which is assumed to contain log transformed data.
|
Value
object of the indicated class.
[Package
MAST version 1.8.2
Index]