evalLogLikZINB_comp {LineagePulse}R Documentation

Compiled function: evalLogLikZINB

Description

Pre-compile heavily used functions. Refer to evalLogLikZINB

Usage

evalLogLikZINB_comp(vecCounts, vecMu, vecDisp, vecPi, vecidxNotZero, vecidxZero)

Arguments

vecCounts

(count vector number of samples) Observed read counts, not observed are NA.

vecMu

(vector number of samples) Negative binomial mean parameter.

vecDisp

(scalar vector number of samples) Negative binomial dispersion parameters.

vecPi

(probability vector number of samples) Drop-out rate estimates.

vecidxNotZero

(bool vector number of samples) Whether observation is larger than zero.

vecidxZero

(bool vector number of samples) Whether observation is zero.

Value

scaLogLik (scalar) Likelihood under zero-inflated negative binomial model.

Author(s)

David Sebastian Fischer

See Also

evalLogLikZINB


[Package LineagePulse version 1.2.1 Index]