changeOrgDb {LINC} | R Documentation |
The standard gene annotation in LINC is "org.Hs.eg.db"
. This function is only relevant in case the input gene expression matrix is from another organism than Homo Sapiens.
changeOrgDb(object, OrgDb)
object |
an instance of the |
OrgDb |
has to be one of:
|
object with changed gene annotation hook
Please, also consider the documentation of clusterProfiler and ReactomePA.
Manuel Goepferich
data(BRAIN_EXPR) # change the used gene annotation, here from "human" to "mouse" murine_matrix <- changeOrgDb(crbl_matrix, OrgDb = 'org.Mm.eg.db')