examdata_bg {FoldGO} | R Documentation |
We used genes from two datasets in examples:
RNA-seq experiment on auxin treatment of Arabidopsis thaliana roots (degenes)
RNA-seq experiment on mRNA differential expression in LNCaP cells expressing the wild-type androgen receptor (AR-WT) or the ligand-independent AR-V7 splice variant (degenes_hum)
bggenes bggenes_hum
A vector containing the GeneIDs with 18039 and 38238 for A. thaliana and H. sapiens correspondingly
A. thaliana and auxin: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE97258
H. sapiens LNCap AR-V7: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71334
# load background genes from A. thaliana RNA-seq experiment data("bggenes")