PlotPattern {EBSeq} | R Documentation |
'PlotPattern' generates the visualized patterns before the multiple condition test.
PlotPattern(Patterns)
Patterns |
The output of GetPatterns function. |
A heatmap to visualize the patterns of interest.
Ning Leng
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)
Conditions = c("C1","C1","C2","C2","C3","C3") Patterns = GetPatterns(Conditions) PlotPattern(Patterns)