deepblue_coverage {DeepBlueR} | R Documentation |
Send a request to count the number of regions in the result of the given query.
deepblue_coverage(query_id = NULL, genome = NULL, user_key = deepblue_options("user_key"))
query_id |
- A string (Query ID) |
genome |
- A string (Genome where the coverage will be calculated to) |
user_key |
- A string (users token key) |
request_id - A string (Request ID - Use it to retrieve the result with info() and get_request_data())
Other Operating on the data regions: deepblue_aggregate
,
deepblue_binning
,
deepblue_count_regions
,
deepblue_distinct_column_values
,
deepblue_extend
,
deepblue_filter_regions
,
deepblue_flank
,
deepblue_get_experiments_by_query
,
deepblue_get_regions
,
deepblue_input_regions
,
deepblue_intersection
,
deepblue_merge_queries
,
deepblue_overlap
,
deepblue_query_cache
,
deepblue_query_experiment_type
,
deepblue_score_matrix
,
deepblue_select_annotations
,
deepblue_select_experiments
,
deepblue_select_regions
,
deepblue_tiling_regions
data_id = deepblue_select_experiments( experiment_name="E002-H3K9ac.narrowPeak.bed") deepblue_coverage(query_id = data_id, genome="hg19")