plot,graphGML,missing-method {CytoML} | R Documentation |
The node with dotted order represents the population that has tailored gates (sample-specific gates) defined.
## S4 method for signature 'graphGML,missing' plot(x, y = "missing", label = c("popName", "gateName"))
x |
a graphNEL generated by constructTree function |
y |
not used |
label |
specifies what to be dispaled as node label. Can be either 'popName' (population name parsed from GateSets) or 'gateName'(the name of the actual gate associated with each node) |
nothing
xmlfile <- system.file("extdata/cytotrol_tcell_cytobank.xml", package = "CytoML") g <- read.gatingML.cytobank(xmlfile) plot(g)