ploidy {ChIPanalyser} | R Documentation |
ploidy
slot in a
occupancyProfileParameters
object
Accessor method for the ploidy
slot in a
occupancyProfileParameters
object
ploidy(object)
object |
|
Default value for ploidy
is set a 2. It should be mentioned that
ChIPanalyser is based on a model that also considers the ploidy of the
organism of interest however this only considers simple polyploidy
(or haploidy). The model does not consider hybrids such as wheat.
Returns the value assigned to the ploidy
slot in a
occupancyProfileParameters
object
Patrick C. N. Martin <pm16057@essex.ac.uk>
Zabet NR, Adryan B (2015) Estimating binding properties of transcription factors from genome-wide binding profiles. Nucleic Acids Res., 43, 84–94.
# Building occupancyProfileParameters object OPP <- occupancyProfileParameters() #Setting new Value for maxSignal ploidy(OPP)