getQualityScore {CNVtools}R Documentation

Computes a quality score for a CNV fit

Description

The quality scores measures how well the clusters are separated. It ocmpares the locations of the means with the standard error for each pair of adjacent cluster. A quality score greater than 4 is usually good enough for association studies.

Usage

getQualityScore(posterior)

Arguments

posterior

A data frame generated by CNVtest.binary

Value

One number, the quality score.

Author(s)

Vincent Plagnol vincent.plagnol@cimr.cam.ac.uk and Chris Barnes christopher.barnes@imperial.ac.uk


[Package CNVtools version 1.76.0 Index]