moleculesGR2CTSS {CAGEr}R Documentation

moleculesGR2CTSS

Description

Calculates CTSS positions from a GenomicRanges object where each element represents a single molecule.

Usage

moleculesGR2CTSS(gr)

Arguments

gr

A GRanges object.

Value

Returns a GRanges object.

See Also

Other loadFileIntoGPos: bam2CTSS, import.CTSS, import.bam.ctss, import.bam, import.bedCTSS, import.bedScore, import.bedmolecule, loadFileIntoGPos

Examples

gr <- GenomicRanges::GRanges("chr1", IRanges::IRanges(1, 10), c("+", "-", "+"))
CAGEr:::moleculesGR2CTSS(gr)

[Package CAGEr version 1.24.0 Index]