inputFiles {CAGEr} | R Documentation |
Extracts the paths to CAGE data input files from
CAGEset
and CAGEexp
objects.
inputFiles(object) ## S4 method for signature 'CAGEset' inputFiles(object) ## S4 method for signature 'CAGEexp' inputFiles(object) inputFiles(object) <- value ## S4 replacement method for signature 'CAGEset' inputFiles(object) <- value ## S4 replacement method for signature 'CAGEexp' inputFiles(object) <- value
object |
A CAGEset or CAGEexp object. |
value |
A character vector with one file path per sample. |
Returns a character vector of paths to CAGE data input files.
Vanja Haberle
Charles Plessy
Other CAGEr accessor methods: CTSSclusteringMethod
,
CTSScoordinates
,
CTSScumulativesTagClusters
,
CTSSnormalizedTpm
,
CTSStagCountTable
,
CTSStagCount
, GeneExpDESeq2
,
GeneExpSE
,
consensusClustersGR
,
genomeName
, inputFilesType
,
librarySizes
, sampleLabels
,
seqNameTotalsSE
, tagClusters
Other CAGEr setter methods: genomeName
,
inputFilesType
, sampleLabels
,
setColors
inputFiles(exampleCAGEset)