rmvSpliceVariant {BiGGR} | R Documentation |
Removes alternative splicing information from the database.
rmvSpliceVariant(gene.info)
gene.info |
A reaction gene maping from the ReconX database created from functions |
A n x 2 dimentional dataframe of Reaction-Gene(Entrez number) mapping from ReconX database
Anand Gavai <anand.gavai@bioinformatics.nl>, Hannes Hettling
Thiele, I. et al. Nat Biotech, 2013
data(Recon2) gene.info <- extractGeneAssociations(Recon2) gene.info<-do.call(rbind.data.frame,gene.info) colnames(gene.info)<-c("GPR") gene.info$react_id<-row.names(gene.info) gene.info<-gene.info[,c(2,1)] rownames(gene.info)<-NULL react_gene_map<-rmvSpliceVariant(gene.info)