writeListOfGAlignments {ATACseqQC}R Documentation

export list of GAlignments into bam files

Description

wraper for export to export list of GAlignment into bam files.

Usage

writeListOfGAlignments(objs, outPath = ".")

Arguments

objs

A list of GAlignments.

outPath

character(1). Output file path.

Value

status of export.

Author(s)

Jianhong Ou

Examples

library(GenomicAlignments)
gal1 <- GAlignments(seqnames=Rle("chr1"), pos=1L, cigar="10M",
                    strand=Rle(strand(c("+"))), names="a", score=1)
galist <- GAlignmentsList(a=gal1)
writeListOfGAlignments(galist)

[Package ATACseqQC version 1.6.4 Index]