meanAcrossAssays {roar}R Documentation

Private/inner/helper method to get average counts across samples

Description

This method should not be used by package users. It gets average counts for "pre" or "post" portions (depending on the wantedColumns argument) given the list of assays for one of the two conditions.

Usage

      meanAcrossAssays(assays, wantedColumns)
     

Arguments

assays

A list of matrixes/dataframes.

wantedColumns

The name of the columns ("pre" or "post") whose means should be computed. Average will be calculated on the corresponding rows of the list of matrices/dataframe, working on the given column.

Value

The pvalue for the two.sided Fisher test.


[Package roar version 1.16.0 Index]