getDrugActivityRepeatData {rcellminer} | R Documentation |
Returns a matrix containing repeat activity experiment data for a compound.
getDrugActivityRepeatData(nscStr, concFormat = "NegLogGI50M", onlyCellMinerExps = TRUE)
nscStr |
a string specifying the NSC identifier for the compound. |
concFormat |
a string selected from "NegLogGI50M" or "IC50MicroM". "NegLogGI50M" specifies activities as the negative log of the 50 inhibitory concentration (molar). "IC50MicroM" specifies activities as the 50 growth inhibitory concentration (micromolar). |
onlyCellMinerExps |
a logical value indicating whether to only return experimental data included in CellMiner (default=TRUE). |
a matrix with activity data from each experiment associated with a compound organized along the rows.
nscStr <- "609699" actData <- getDrugActivityRepeatData(nscStr, concFormat='NegLogGI50M') actData <- getDrugActivityRepeatData(nscStr, concFormat='IC50MicroM')