rnadeg {qcmetrics} | R Documentation |
A simple wrapper function that uses affy
's RNA
degradation curves and yaqcaffy
's actin and GAPDH
3'/5' ratios to generate a simple RNA degradation
QcMetrics
results. Optionally generates a QC
report. See the qcmetrics
vignette for an
explanation of the function and an example.
rnadeg(input, status, type, reportname = "rnadegradation")
input |
A |
status |
A |
type |
The |
reportname |
The name of the report. |
Invisibly return the QcMetrics
for the
input
.
Laurent Gatto
QcMetric
and QcMetrics
for
details about the QC infrastructure and
qcReport
for information about the report
generation.