gseaPlot {phantasus}R Documentation

Returns path to an svg file with enrichment plot

Description

Returns path to an svg file with enrichment plot

Usage

gseaPlot(fData, fvarLabels, rankBy, selectedGenes, width, height)

Arguments

fData

list of annotation columns

fvarLabels

vector of column names

rankBy

name of the numeric column used for gene ranking

selectedGenes

indexes of selected genes (starting from one, in the order of fData)

width

width of the image (in inches)

height

height of the image (in inches)

Value

path to an svg file


[Package phantasus version 1.0.2 Index]