calcPCA {phantasus} | R Documentation |
calcPCA
calculates PCA-matrix for the given ExpressionSet
and returns this matrix encoded to JSON.
calcPCA(es, columns = c(), rows = c(), replacena = "mean")
es |
an ExpressionSet object, should be normalized |
columns |
list of specified columns' indices (optional) |
rows |
list of specified rows' indices (optional) |
replacena |
method for replacing NA values (mean by default) |
json with full description of the plot for plotly.js
## Not run: data(es) calcPCA(es) ## End(Not run)