find_optima {microbiome}R Documentation

Find Optima

Description

Detect optima, excluding local optima below peak.threshold.

Usage

find_optima(f, peak.threshold = 0, bw = 1, min.density = 1)

Arguments

f

density

peak.threshold

Mode detection threshold

bw

bandwidth

min.density

Minimun accepted density for a maximum; as a multiple of kernel height

Value

A list with min (minima), max (maxima), and peak.threshold (minimum detection density)

Author(s)

Leo Lahti leo.lahti@iki.fi

References

See citation('microbiome')

Examples

## Not run: 
   # Not exported
   o <- find_optima(rnorm(100), bw=1)

## End(Not run)

[Package microbiome version 1.2.1 Index]