metaGene_nL {groHMM} | R Documentation |
Supports parallel processing using mclapply in the 'parallel' package. To change the number of processors, use the argument 'mc.cores'.
metaGene_nL(features, reads, n_windows = 1000, debug = FALSE, ...)
features |
A GRanges object representing a set of genomic coordinates. |
reads |
A GRanges object representing a set of mapped reads. |
n_windows |
The number of windows to break genes into. |
debug |
If set to TRUE, provides additional print options. Default: FALSE |
... |
Extra argument passed to mclapply |
Returns a vector representing the 'typical' signal across genes of different length.
Charles G. Danko and Minho Chae