limitToXkb {groHMM} | R Documentation |
limitToXkb truncates a set of genomic itnervals at a constant, maximum size.
limitToXkb(features, offset = 1000, size = 13000)
features |
A GRanges object representing a set of genomic coordinates. The meta-plot will be centered on the start position. |
offset |
Starts the interval from this position relative to the start of each genomic features. |
size |
Specifies the size of the window. |
Returns GRanges object with new genomic coordiates.
Minho Chae and Charles G. Danko
tx <- GRanges("chr7", IRanges(1000, 30000), strand="+") newTX <- limitToXkb(tx)