fCI-class {fCI} | R Documentation |
"fCI"
The main Class that defines the slots values
Objects can be created by calls of the form new("fCI", ...)
.
sample.data.file
:Object of class "character"
~~
distance.matrix
:Object of class "matrix"
~~
sample.data.normalized
:Object of class "data.frame"
~~
attr.info
:Object of class "data.frame"
~~
null.data.start
:Object of class "matrix"
~~
diff.data.start
:Object of class "matrix"
~~
expr.by.fold
:Object of class "matrix"
~~
fold.cutoff.list
:Object of class "list"
~~
rank.index.to.be.removed
:Object of class "list"
~~
diff.gene.ids
:Object of class "list"
~~
wt.index
:Object of class "numeric"
~~
df.index
:Object of class "numeric"
~~
ctr.indexes
:Object of class "numeric"
~~
trt.indexes
:Object of class "numeric"
~~
method.option
:Object of class "numeric"
~~
use.ratio
:Object of class "logical"
~~
percent.genes.to.scan
:Object of class "numeric"
~~
num.genes.to.skip.each
:Object of class "numeric"
~~
use.fold.change
:Object of class "logical"
~~
wt.comb
:Object of class "list"
~~
df.comb
:Object of class "list"
~~
diff.ids
:Object of class "list"
~~
result
:Object of class "numeric"
~~
indexes.reconsidered
:Object of class "numeric"
~~
center.by.gaussian.kernel
:Object of class "logical"
~~
symmetric.fold
:Object of class "logical"
~~
pairwise.diff.gene.ids
:Object of class "list"
~~
No methods defined with class "fCI" in the signature.
TBD
Shaojun Tang
http://software.steenlab.org/fCI/
TBD
showClass("fCI")