tcga_colon_expression {epivizrChart} | R Documentation |
A RangedSummarizedExperiment
object containing exon-level
counts from RNAseq data for colon tumor and normal tissue from the TCGA project.
Only exons in human chromosome 11 are included.
tcga_colon_expression
A RangedSummarizedExperiment
object with 12,800 rows (exons) and 40 samples.
assay(tcga_colon_expression)
exon-level count matrix
colData(tcga_colon_expression)
a DataFrame
containing sample information.
Normal/Tumor status is given in column sample_type
A RangedSummarizedExperiment
object.
TCGA project: https://tcga-data.nci.nih.gov/tcga/