IRanges additional methods {easyRNASeq} | R Documentation |
Return the ranges of the genomic annotation.
## S4 method for signature 'RNAseq' ranges(x)
x |
An object of the |
It retrieves the object stored in the genomicAnnotation slot of the RNAseq
object and apply the ranges
function on it. The object retrieved can
be of the RangedData
or
GRangesList
class.
An IRangesList
object, where the split
is performed by seqnames (e.g. chromosomes).
Nicolas Delhomme
## Not run: library("RnaSeqTutorial") obj <- getAnnotation( AnnotParam( organism="Dmelanogaster", datasource=system.file( "extdata", "Dmel-mRNA-exon-r5.52.gff3", package="RnaSeqTutorial"), type="gff3" )) ranges(obj) ## End(Not run)