dm_predict {destiny} | R Documentation |
Predict new data points using an existing DiffusionMap. The resulting matrix can be used in the plot method for the DiffusionMap
dm_predict(dm, new_data, ..., verbose = FALSE)
dm |
A |
new_data |
New data points to project into the diffusion map. Can be a matrix, data.frame, ExpressionSet, or SingleCellExperiment. |
... |
Passed to |
verbose |
Show progress messages? |
A nrow(new\_data) \times ncol(eigenvectors(dif)) matrix of projected diffusion components for the new data.
data(guo) g1 <- guo[, guo$num_cells != 32L] g2 <- guo[, guo$num_cells == 32L] dm <- DiffusionMap(g1) dc2 <- dm_predict(dm, g2) plot(dm, new_dcs = dc2)