load_raw {crossmeta} | R Documentation |
Loads and annotates raw data previously downloaded with get_raw
.
Supported platforms include Affymetrix, Agilent, and Illumina.
load_raw(gse_names, data_dir = getwd(), gpl_dir = "..", overwrite = FALSE)
gse_names |
Character vector of GSE names. |
data_dir |
String specifying directory with GSE folders. |
gpl_dir |
String specifying parent directory to search for previously downloaded GPL.soft files. |
overwrite |
Do you want to overwrite saved esets from previous |
List of annotated esets.
library(lydata) data_dir <- system.file("extdata", package = "lydata") eset <- load_raw("GSE9601", data_dir = data_dir)