negativeIntensitiesCorrection {clippda}R Documentation

A function to correct the data for the negative intensities caused by the normalization and background correction procedures of mass spectrometry data

Description

This function corrects the mass spectra data, which has been pre-processed using tools tools from the Biomarkers Wizard PROcess softwares, for the negative intensities caused by their normalization and background correction procedures.

Usage

negativeIntensitiesCorrection(Data)

Arguments

Data

is a dataframe , or a matrix, or a vector, of numerical values.

Value

A dataframe , or a matrix, or a vector (whichever is the input quantity), of nonnegative numerical values.

Author(s)

Stephen Nyangoma

Examples

data(liverdata)

no.peaks <- 53

JUNK_DATA <- sampleClusteredData(liverdata,no.peaks)

Data=JUNK_DATA

Data=JUNK_DATA
Data=Data+1
temp=negativeIntensitiesCorrection(Data)
temp[,1]
Data[,1]

[Package clippda version 1.30.0 Index]