TCGAutils-package {TCGAutils} | R Documentation |
TCGAutils is a toolbox to work with TCGA specific datasets. It allows the
user to manipulate and translate TCGA barcodes, conveniently convert a list
of data files to GRangesList. Take datasets from GISTIC and
return a SummarizedExperiment class object. The package also
provides functions for working with data from the curatedTCGAData
experiment data package. It provides convenience functions for extracting
subtype metadata data and adding clinical data to existing
MultiAssayExperiment objects.
Maintainer: Marcel Ramos marcel.ramos@roswellpark.org
Other contributors:
Lucas Schiffer [contributor]
WaldronLab [contributor]
Useful links:
Report bugs at https://github.com/waldronlab/TCGAutils/issues