IAccr {SemDist}R Documentation

Information Accretion Data

Description

This data set contains the information accretion values for each term in the requested ontology/species.

Usage

IAccr

Format

A named numeric vector with one value corresponding to each GO accession in the ontology.

Source

The gene ontology data was obtained from the GO.db package and the annotation data was obtained from the following packages for each organism:

anopheles = org.Ag.eg.db

arabidopsis = org.At.tair.db

bovine = org.Bt.eg.db

canine = org.Cf.eg.db

chicken = org.Gg.eg.db

chimp = org.Pt.eg.db

ecolik12 = org.EcK12.eg.db

fly = org.Dm.eg.db

human = org.Hs.eg.db

malaria = org.Pf.plasmo.db

mouse = org.Mm.eg.db

pig = org.Ss.eg.db

rat = org.Rn.eg.db

rhesus = org.Mmu.eg.db

worm = org.Ce.eg.db

xenopus = org.Xl.eg.db

yeast = org.Sc.sgd.db

zebrafish = org.Dr.eg.db

Examples

data("Info_Accretion_mouse_CC", package = "SemDist")
str(IAccr)

[Package SemDist version 1.14.0 Index]