callLOH {PureCN} | R Documentation |
This function provides detailed LOH information by region.
callLOH(res, id = 1, arm.cutoff = 0.9)
res |
Return object of the |
id |
Candidate solution to extract LOH from. |
arm.cutoff |
Min fraction LOH on a chromosome arm to call whole arm events. |
Returns data.frame
with LOH regions.
Markus Riester
data(purecn.example.output) head(callLOH(purecn.example.output))