PharmacoSet {PharmacoGx} | R Documentation |
A constructor that simplifies the process of creating PharmacoSets, as well as creates empty objects for data not provided to the constructor. Only objects returned by this constructor are expected to work with the PharmacoSet methods. For a much more detailed instruction on creating PharmacoSets, please see the "CreatingPharmacoSet" vignette.
PharmacoSet(name, molecularProfiles = list(), cell = data.frame(), drug = data.frame(), sensitivityInfo = data.frame(), sensitivityRaw = array(dim = c(0, 0, 0)), sensitivityProfiles = matrix(), sensitivityN = matrix(nrow = 0, ncol = 0), perturbationN = array(NA, dim = c(0, 0, 0)), curationDrug = data.frame(), curationCell = data.frame(), curationTissue = data.frame(), datasetType = c("sensitivity", "perturbation", "both"), verify = TRUE)
name |
A |
molecularProfiles |
A |
cell |
A |
drug |
A |
sensitivityInfo |
A |
sensitivityRaw |
A 3 Dimensional |
sensitivityProfiles |
|
sensitivityN, perturbationN |
A |
curationDrug, curationCell, curationTissue |
A |
datasetType |
A |
verify |
|
An object of class PharmacoSet
## For help creating a PharmacoSet object, please see the following vignette: browseVignettes("PharmacoGx")