mulOptPlot {Mulcom} | R Documentation |
MulCom optimization Plot to identify best configuration paramters
mulOptPlot(M.Opt, ind, th, smooth = "NO")
M.Opt |
an MulCom optimization object |
ind |
index corresponding to the comparison to plot |
th |
a threshold for the FDR plot |
smooth |
indicates whether the FDR plot will show a significant threshold or will be continuous. |
mulOptPlot
MulCom optimization Plot
a numeric vector
Claudio Isella, claudio.isella@ircc.it
data(benchVign) mulcom_perm <- mulPerm(Affy, Affy$Groups, 10,2) mulcom_opt <- mulOpt(mulcom_perm, vm=seq(0.1, 0.5, 0.1), vt=seq(1, 3,1)) mulOptPlot(mulcom_opt, 1, 0.05)