freq {MAST}R Documentation

Summary statistics for genes in an experiment

Description

freq returns the frequency of expression, i.e., the proportion of non-zero values in sc. NAs can be optionally removed

Usage

freq(sc, na.rm = TRUE)

condmean(sc)

condSd(sc)

numexp(sc)

Arguments

sc

SingleCellAssay

na.rm

should NAs be removed, or carried through?

Value

vector of proportions

Functions

Examples

data(vbetaFA)
freq(vbetaFA)
condmean(vbetaFA)

[Package MAST version 1.6.1 Index]