overview_plot {IrisSpatialFeatures} | R Documentation |
Plot all coordinates in a given dataset
overview_plot(x, ...) ## S4 method for signature 'ImageSet' overview_plot(x, outdir = "./", palette = NULL, type = "pdf", width = 10, height = 7)
x |
Sample ImageSet object of the IrisSpatialFeatures package. |
... |
Additional arguments |
outdir |
Output directory (default: './') |
palette |
Color palette used for the different cell-types. (default: NULL) |
type |
File format for the plots. Can bei either 'pdf' or 'png'. (default: 'pdf') |
width |
Width of the plot in inches for pdf and pixels for png. (default: 10) |
height |
Heigth of the plot in inches for pdf and pixels for png. (default: 7) |
plot of all coordinates
#loading pre-read dataset dataset <- IrisSpatialFeatures_data overview_plot(dataset)