get_proximities {IrisSpatialFeatures} | R Documentation |
Get proximity data for a given cell-type
get_proximities(x, ...) ## S4 method for signature 'ImageSet' get_proximities(x, marker, normalize = TRUE)
x |
An IrisSpatialFeatures ImageSet object. |
... |
Additional arguments. |
marker |
Cell type for which the proximity data should be extracted. |
normalize |
Flag indicating whether the populations should be normalized so that the sum of all is 1 (default: TRUE). |
proximities for a specific cell-type