getMixture.JointUniquePairs {IdMappingAnalysis} | R Documentation |
Extract mixture model object from UniquePairsMatch and Corr objects. Computes mixture model on Corr object optionally subsetting the Corr object on a list of ID Maps from the JointUniquePairs object.
## S3 method for class 'JointUniquePairs' getMixture(this, corr, groups=NULL, full.group=FALSE, G=c(1:5), verbose=FALSE, ...)
corr |
Corr object. |
groups |
Optional |
full.group |
If@ TRUE, uses Corr subset to compute the mixture model or uses the
original Corr otherwise. Default is |
G |
the number of mixture model components. If a numerical vector, the optimal mixture model is computed. Default is c(1:5). |
verbose |
|
... |
Not used |
the Mixture object.
Alex Lisovich, Roger Day
For more information see JointUniquePairs
.
# create and plot mixture (automatically determining the optimal number of components) #for a given DB subset treating the subset as a full group mixture.subset <- examples$jointUniquePairs$getMixture(examples$corr, groups=c("NetAffx_Q", "DAVID_Q", "EnVision_Q"), full.group=TRUE, G=c(1:5), verbose=TRUE); mixture.subset$plot();