subsetByOverlaps,GenoGAMDataSet,GRanges-method {GenoGAM} | R Documentation |
GenoGAMDataSet
Subsetting the GenoGAMDataSet
by a GRanges
object
## S4 method for signature 'GenoGAMDataSet,GRanges' subsetByOverlaps(x, ranges, maxgap = -1L, minoverlap = 0L, type = c("any", "start", "end", "within", "equal"), ...)
x |
A |
ranges |
A |
maxgap, minoverlap, type |
See |
... |
Additional parameters |
A subsetted GenoGAMDataSet
object.
Georg Stricker georg.stricker@in.tum.de
ggd <- makeTestGenoGAMDataSet() gr <- GRanges("chrI", IRanges(1,50)) res <- subsetByOverlaps(ggd, gr)