Alphabet {DiffLogo}R Documentation

built alphabet

Description

builts an object of class Alphabet from the given set of symbols and colors

Usage

Alphabet(chars, cols, supportReverseComplement)

Arguments

chars

set of symbols

cols

set of colors; one for each symbol

supportReverseComplement

boolean whether the alphabet supports reverse complementation (like DNA/RNA) or not (like ASN)

Value

the Alphabet object

Author(s)

Martin Nettling

Examples

DNA = Alphabet(c("A","C","G","T"),c("green4","blue","orange","red"),TRUE)

[Package DiffLogo version 2.4.0 Index]