cytobank2GatingSet {CytoML}R Documentation

A wrapper that parse the gatingML and FCS files into GatingSet

Description

A wrapper that parse the gatingML and FCS files into GatingSet

Usage

cytobank2GatingSet(xml, FCS)

Arguments

xml

the full path of gatingML file

FCS

FCS files to be loaded

Value

a GatingSet

Examples


xmlfile <- system.file("extdata/cytotrol_tcell_cytobank.xml", package = "CytoML")
fcsFiles <- list.files(pattern = "CytoTrol", 
      system.file("extdata", package = "flowWorkspaceData"), full = TRUE)
gs <- cytobank2GatingSet(xmlfile, fcsFiles)
#plotGate(gs[[1]])


[Package CytoML version 1.6.5 Index]