patternMatcher {CoGAPS}R Documentation

PatternMatcher Shiny Ap

Description

PatternMatcher Shiny Ap

Usage

patternMatcher(PBySet = NULL, out = NULL, order = NULL,
  sample.color = NULL)

Arguments

PBySet

list of matched set solutions for the Pmatrix from an NMF algorithm

out

optional name for saving output

order

optional vector indicating order of samples for plotting. Default is NULL.

sample.color

optional vector of colors of same length as colnames. Default is NULL.

Value

either an index of selected sets' contributions or the editted PBySet object


[Package CoGAPS version 3.0.2 Index]