plotSmoothPatterns {CoGAPS}R Documentation

Plot Smooth Patterns

Description

Plot Smooth Patterns

Usage

plotSmoothPatterns(P, x = NULL, breaks = NULL, breakStyle = TRUE,
  orderP = !all(is.null(x)), plotPTS = FALSE, pointCol = "black",
  lineCol = "grey", add = FALSE, ...)

Arguments

P

the mean A matrix

x

optional variables

breaks

breaks in plots

breakStyle

style of breaks

orderP

whether to order patterns

plotPTS

whether to plot points on lines

pointCol

color of points

lineCol

color of line

add

logical specifying if bars should be added to an already existing plot; defaults to ‘FALSE’.

...

arguments to be passed to/from other methods. For the default method these can include further arguments (such as ‘axes’, ‘asp’ and ‘main’) and graphical parameters (see ‘par’) which are passed to ‘plot.window()’, ‘title()’ and ‘axis’.

Details

plots the output A and P matrices as a heatmap and a line plot respectively

Value

plot


[Package CoGAPS version 3.0.2 Index]