maxSignal {ChIPanalyser} | R Documentation |
maxSignal
slot in a
occupancyProfileParameters
object.
Accessor method for the maxSignal
slot in a
occupancyProfileParameters
object.
maxSignal(object)
object |
|
In the context of ChIPanalyser
, maxSignal
represents the
maximum normalised ChIP-Seq signal of a given Transcription factor
(or DNA binding protein). Although, A default value of 1 has been assigned to
this slot, we strongly recommend to tailor this value accordingly.
We strongly encourage to set values when building a
occupancyProfileParameters
object.
Returns the value assigned to the maxSignal
slot in a
occupancyProfileParameters
object.
Patrick C.N. Martin <p.martin@essex.ac.uk>
Zabet NR, Adryan B (2015) Estimating binding properties of transcription factors from genome-wide binding profiles. Nucleic Acids Res., 43, 84–94.
# Building occupancyProfileParameters object OPP <- occupancyProfileParameters() #Setting new Value for maxSignal maxSignal(OPP)