ora_data {CEMiTool} | R Documentation |
Retrieve over representation analysis (ORA) results
ora_data(cem) ## S4 method for signature 'CEMiTool' ora_data(cem)
cem |
Object of class |
Object of class data.frame
with ORA data
# Get example CEMiTool object data(cem) # Read gmt file gmt <- read_gmt(system.file('extdata', 'pathways.gmt', package='CEMiTool')) # Run module overrepresentation analysis cem <- mod_ora(cem, gmt) # Check results head(ora_data(cem))