CTSScumulativesTagClusters {CAGEr} | R Documentation |
Accessor function.
CTSScumulativesTagClusters(object, samples = NULL) ## S4 method for signature 'CAGEset' CTSScumulativesTagClusters(object, samples = NULL) ## S4 method for signature 'CAGEexp' CTSScumulativesTagClusters(object, samples = NULL) CTSScumulativesCC(object, samples = NULL) ## S4 method for signature 'CAGEset' CTSScumulativesCC(object, samples = NULL) ## S4 method for signature 'CAGEexp' CTSScumulativesCC(object, samples = NULL) CTSScumulativesTagClusters(object) <- value ## S4 replacement method for signature 'CAGEset' CTSScumulativesTagClusters(object) <- value ## S4 replacement method for signature 'CAGEexp' CTSScumulativesTagClusters(object) <- value
object |
|
samples |
One or more valid sample names. |
value |
CTSScumulativesTagClusters data |
List of numeric Rle.
Other CAGEr clusters functions: CTSSclusteringMethod
,
CustomConsensusClusters
,
aggregateTagClusters
,
clusterCTSS
,
consensusClustersDESeq2
,
consensusClustersGR
,
cumulativeCTSSdistribution
,
plotInterquantileWidth
,
quantilePositions
,
tagClusters
Other CAGEr accessor methods: CTSSclusteringMethod
,
CTSScoordinates
,
CTSSnormalizedTpm
,
CTSStagCountTable
,
CTSStagCount
, GeneExpDESeq2
,
GeneExpSE
, genomeName
,
inputFilesType
, inputFiles
,
librarySizes
, sampleLabels
,
seqNameTotalsSE
, tagClusters