GeneExpSE {CAGEr} | R Documentation |
Get or set a SummarizedExperiment
using the gene expression
data in the experiment slot geneExpMatrix
and the sample metadata
of the CAGEexp
object.
GeneExpSE(object) ## S4 method for signature 'CAGEset' GeneExpSE(object) ## S4 method for signature 'CAGEexp' GeneExpSE(object)
object |
A |
Charles Plessy
Other CAGEr accessor methods: CTSSclusteringMethod
,
CTSScoordinates
,
CTSScumulativesTagClusters
,
CTSSnormalizedTpm
,
CTSStagCountTable
,
CTSStagCount
, GeneExpDESeq2
,
genomeName
, inputFilesType
,
inputFiles
, librarySizes
,
sampleLabels
,
seqNameTotalsSE
, tagClusters
GeneExpSE(exampleCAGEexp)