SpidermiRprepare_NET {SpidermiR}R Documentation

Prepare matrix of gene network from Genamania with Ensembl Gene ID, and gene symbols

Description

The user in this step obtained a gene network matrix with the integration of gene symbols ID.

Usage

SpidermiRprepare_NET(organismID, data)

Arguments

organismID

is the index of SpidermiRquery_spec_networks output

data

is the output of function SpidermiRdownload_net

Value

A list of tables.

Examples

org<-SpidermiRquery_species(species)
net_shar_prot<-SpidermiRquery_spec_networks(organismID = org[9,],
network = "SHpd")
out_net<-SpidermiRdownload_net(data=net_shar_prot)
geneSymb_net<-SpidermiRprepare_NET(organismID = org[9,],
                                       data = out_net)

[Package SpidermiR version 1.8.2 Index]